BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023E08SP1|AL428070
(782 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1759 1426 0.0
>3x_Contig1759
Length = 25622
Score = 1426 bits (712), Expect = 0.0
Identities = 764/782 (97%), Gaps = 5/782 (0%)
Strand = Plus / Minus
Query: 2 tctcttggacgattttaagaaatttttgccggactcttctgtttcacagcaacaacaaga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15893 tctcttggacgattttaagaaatttttgccggactcttctgtttcacagcaacaacaaga 15834
Query: 62 acaacaacaagaaccacagcaacaacaacaagatcagcaacaggaacaccaacaagatca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15833 acaacaacaagaaccacagcaacaacaacaagatcagcaacaggaacaccaacaagatca 15774
Query: 122 ggagcagcaacatcatgagcaaaaacagcaaccgttaccgcaagatcaaaatcagcaagc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15773 ggagcagcaacatcatgagcaaaaacagcaaccgttaccgcaagatcaaaatcagcaagc 15714
Query: 182 aatgctcccaccccaaccttacttacaacaaaatcaatctatgcagggacaaggattcta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15713 aatgctcccaccccaaccttacttacaacaaaatcaatctatgcagggacaaggattcta 15654
Query: 242 tccacaatctggagtktttatagcagccgacgaaccttcctccattaggaaatttttctg 301
||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 15653 tccacaatctggagtgttaat-gcagccgacgaaccttcctccattaggaaatttttctg 15595
Query: 302 cttcaggccaagtcatcgccggctgaaaatagtcwtatkctaccatctatgcaccagcac 361
|||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 15594 cttcaggccaag-catcgccggctgaaaatagtcatatgctaccatctatgcaccagcac 15536
Query: 362 attgcaggtgggcacgtgatacctcaacatgttgtgacacaaggtwtgtccaaccaggaa 421
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 15535 attgcaggtgggcacgtgatacctcaacatgttgtgacacaaggtatgtccaaccagg-a 15477
Query: 422 tattcctgtatctgamatgagatcaaccatgaatggcacttataatcaagtagagtacat 481
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15476 tattcctgtatctgaaatgagatcaaccatgaatggcacttataatcaagtagagtacat 15417
Query: 482 tcagggtg-cccaggttatcctcaaccacttgaaggtgtgcaatacatggaagctcctat 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15416 tcagggtgccccaggttatcctcaaccacttgaaggtgtgcaatacatggaagctcctat 15357
Query: 541 ggctagacctgaaattgacttggacccaagtcttgtacccgtcgtaccagaaccaataca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15356 ggctagacctgaaattgacttggacccaagtcttgtacccgtcgtaccagaaccaataca 15297
Query: 601 acctcctgaagatgccattgcattaggtgatgaagtgacgttctttgawagagtgawaag 660
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 15296 acctcctgaagatgccattgcattaggtgatgaagtgacgttctttgaaagagtgaaaag 15237
Query: 661 gtttawtggaaamaagcaagtttacgctgagttttttgawaattcttaatttgtactcac 720
||||| |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 15236 gtttattggaaacaagcaagtttacgctgag-tttttgaaaattcttaatttgtactcac 15178
Query: 721 aagatcttctaacaacctctgaattggtctcgaaggtggrattctaattgcatagctcta 780
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 15177 aagatcttctaacaacctctgaattggtctcgaaggtggaattctatttgcatagctcta 15118
Query: 781 aa 782
||
Sbjct: 15117 aa 15116
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5764
Number of Sequences: 1807
Number of extensions: 5764
Number of successful extensions: 555
Number of sequences better than 1.0e-20: 1
length of query: 782
length of database: 10,358,551
effective HSP length: 16
effective length of query: 766
effective length of database: 10,329,639
effective search space: 7912503474
effective search space used: 7912503474
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)